U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RGN regucalcin [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101683471, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
RGN
Gene description
regucalcin
See related
Ensembl:ENSMPUG00000013105
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RGN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422051.1 (3486910..3502801, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569189.1 (9365552..9381450)

NW_025422051.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 10 Neighboring gene NADH:ubiquinone oxidoreductase subunit B11 Neighboring gene jade family PHD finger 3 Neighboring gene RP2 activator of ARL3 GTPase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gluconolactonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-ascorbic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
regucalcin
Names
regucalcin (senescence marker protein-30)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422051.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    3486910..3502801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004754967.3 → XP_004755024.1  regucalcin

    See identical proteins and their annotated locations for XP_004755024.1

    UniProtKB/TrEMBL
    A0A8U0MU34, M3YNV2
    Conserved Domains (3) summary
    cd05819
    Location:203 → 237
    NHL; NHL repeat [structural motif]
    pfam08450
    Location:16 → 264
    SGL; SMP-30/Gluconolaconase/LRE-like region
    cl18310
    Location:166 → 237
    NHL; NHL repeat unit of beta-propeller proteins

  2. XM_004754968.3 → XP_004755025.1  regucalcin

    See identical proteins and their annotated locations for XP_004755025.1

    UniProtKB/TrEMBL
    A0A8U0MU34, M3YNV2
    Conserved Domains (3) summary
    cd05819
    Location:203 → 237
    NHL; NHL repeat [structural motif]
    pfam08450
    Location:16 → 264
    SGL; SMP-30/Gluconolaconase/LRE-like region
    cl18310
    Location:166 → 237
    NHL; NHL repeat unit of beta-propeller proteins

  3. XM_004754966.3 → XP_004755023.2  regucalcin

    See identical proteins and their annotated locations for XP_004755023.2

    UniProtKB/TrEMBL
    A0A8U0MU34, M3YNV2
    Related
    ENSMPUP00000013009.1
    Conserved Domains (3) summary
    cd05819
    Location:203 → 237
    NHL; NHL repeat [structural motif]
    pfam08450
    Location:16 → 264
    SGL; SMP-30/Gluconolaconase/LRE-like region
    cl18310
    Location:166 → 237
    NHL; NHL repeat unit of beta-propeller proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.