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B4GALT4 beta-1,4-galactosyltransferase 4 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101682220, updated on 8-Mar-2024

Summary

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Gene symbol
B4GALT4
Gene description
beta-1,4-galactosyltransferase 4
See related
Ensembl:ENSMPUG00000000257
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See B4GALT4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421987.1 (44034879..44064275, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569222.1 (135872..165270)

NW_025421987.1Genomic Context describing neighboring genes Neighboring gene testis expressed 55 Neighboring gene uroplakin 1B Neighboring gene small nucleolar RNA U13 Neighboring gene Rho GTPase activating protein 31 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421987.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    44034879..44064275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004761379.3 → XP_004761436.1  beta-1,4-galactosyltransferase 4 isoform X1

    See identical proteins and their annotated locations for XP_004761436.1

    UniProtKB/TrEMBL
    M1EEC5, M3XMF4
    Related
    ENSMPUP00000000254.1
    Conserved Domains (1) summary
    cd00899
    Location:122 → 339
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_004761380.3 → XP_004761437.1  beta-1,4-galactosyltransferase 4 isoform X1

    See identical proteins and their annotated locations for XP_004761437.1

    UniProtKB/TrEMBL
    M1EEC5, M3XMF4
    Conserved Domains (1) summary
    cd00899
    Location:122 → 339
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_013060943.2 → XP_012916397.1  beta-1,4-galactosyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8U0NX44
    Conserved Domains (1) summary
    cd00899
    Location:1 → 202
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

RNA

  1. XR_006609099.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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