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RBKS ribokinase [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101681811, updated on 8-Mar-2024

Summary

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Gene symbol
RBKS
Gene description
ribokinase
See related
Ensembl:ENSMPUG00000017991
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See RBKS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422431.1 (2005904..2090966)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569388.1 (2033857..2118761)

NW_025422431.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123390234 Neighboring gene FOS like 2, AP-1 transcription factor subunit Neighboring gene BRISC and BRCA1 A complex member 2 Neighboring gene uncharacterized LOC106004184 Neighboring gene 40S ribosomal protein S4-like Neighboring gene mitochondrial ribosomal protein L33 Neighboring gene solute carrier family 4 member 1 adaptor protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-ribose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribokinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422431.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    2005904..2090966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004777492.3 → XP_004777549.1  ribokinase isoform X4

    UniProtKB/TrEMBL
    A0A8U0ND81
    Conserved Domains (1) summary
    cl00192
    Location:22 → 255
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...

  2. XM_004777491.3 → XP_004777548.1  ribokinase isoform X2

    UniProtKB/TrEMBL
    A0A8U0T6X1, G9KKE8
    Conserved Domains (1) summary
    TIGR02152
    Location:22 → 265
    D_ribokin_bact; ribokinase

  3. XM_045073855.1 → XP_044929790.1  ribokinase isoform X3

    UniProtKB/TrEMBL
    A0A8U0UVH0, G9KKE8
    Conserved Domains (1) summary
    cl00192
    Location:22 → 263
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...

  4. XM_004777490.3 → XP_004777547.1  ribokinase isoform X1

    UniProtKB/TrEMBL
    G9KKE8, M3Z2R8
    Related
    ENSMPUP00000017880.1
    Conserved Domains (1) summary
    TIGR02152
    Location:22 → 318
    D_ribokin_bact; ribokinase
Nucleotide Protein
Heading Accession and Version

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