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PRR3 proline rich 3 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101680978, updated on 8-Mar-2024

Summary

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Gene symbol
PRR3
Gene description
proline rich 3
See related
Ensembl:ENSMPUG00000011797
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See PRR3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422008.1 (2276734..2282577, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569548.1 (384718..390740, complement)

NW_025422008.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 10 Neighboring gene ATP binding cassette subfamily F member 1 Neighboring gene G protein nucleolar 1 (putative) Neighboring gene E3 ubiquitin-protein ligase TRIM39 Neighboring gene ribonuclease P/MRP subunit p21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proline-rich protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422008.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    2276734..2282577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004781614.3 → XP_004781671.1  proline-rich protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8U0NH69
    Conserved Domains (1) summary
    pfam00642
    Location:219 → 242
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

  2. XM_045065219.1 → XP_044921154.1  proline-rich protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A8U0ULX9

  3. XM_004781616.3 → XP_004781673.1  proline-rich protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A8U0NG33, M3YK46
    Related
    ENSMPUP00000011703.1
    Conserved Domains (1) summary
    pfam00642
    Location:158 → 181
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

  4. XM_045065217.1 → XP_044921152.1  proline-rich protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8U0RD93
    Conserved Domains (1) summary
    smart00356
    Location:188 → 210
    ZnF_C3H1; zinc finger

  5. XM_045065218.1 → XP_044921153.1  proline-rich protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A8U0RBX6, G9L1I1

  6. XM_045065216.1 → XP_044921151.1  proline-rich protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8U0RD92
    Conserved Domains (1) summary
    smart00356
    Location:192 → 214
    ZnF_C3H1; zinc finger
Nucleotide Protein
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