U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101680564, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GALNT6
Gene description
polypeptide N-acetylgalactosaminyltransferase 6
See related
Ensembl:ENSMPUG00000007894
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GALNT6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422368.1 (4350743..4386250)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569342.1 (3351560..3387004)

NW_025422368.1Genomic Context describing neighboring genes Neighboring gene sodium voltage-gated channel alpha subunit 8 Neighboring gene solute carrier family 4 member 8 Neighboring gene uncharacterized LOC123390037 Neighboring gene chymotrypsin like elastase 1 Neighboring gene bridging integrator 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
polypeptide N-acetylgalactosaminyltransferase 6
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422368.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    4350743..4386250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004774719.2 → XP_004774776.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_004774776.1

    UniProtKB/TrEMBL
    M3Y929
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_045073390.1 → XP_044929325.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A8U0UV15
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    smart00458
    Location:501 → 574
    RICIN; Ricin-type beta-trefoil

  3. XM_004774722.3 → XP_004774779.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_004774779.1

    UniProtKB/TrEMBL
    M3Y929
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_045073389.1 → XP_044929324.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    M3Y929
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_004774723.3 → XP_004774780.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_004774780.1

    UniProtKB/TrEMBL
    M3Y929
    Related
    ENSMPUP00000007836.1
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  6. XM_004774720.2 → XP_004774777.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_004774777.1

    UniProtKB/TrEMBL
    M3Y929
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  7. XM_013046915.2 → XP_012902369.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_012902369.1

    UniProtKB/TrEMBL
    M3Y929
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  8. XM_004774721.2 → XP_004774778.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_004774778.1

    UniProtKB/TrEMBL
    M3Y929
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  9. XM_013046916.2 → XP_012902370.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_012902370.1

    UniProtKB/TrEMBL
    M3Y929
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  10. XM_004774724.3 → XP_004774781.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    See identical proteins and their annotated locations for XP_004774781.1

    UniProtKB/TrEMBL
    M3Y929
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  11. XM_045073388.1 → XP_044929323.1  polypeptide N-acetylgalactosaminyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    M3Y929
    Conserved Domains (2) summary
    cd02510
    Location:180 → 485
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:497 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

RNA

  1. XR_001176688.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.