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OGDHL oxoglutarate dehydrogenase L [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101679614, updated on 8-Mar-2024

Summary

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Gene symbol
OGDHL
Gene description
oxoglutarate dehydrogenase L
See related
Ensembl:ENSMPUG00000009437
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See OGDHL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422057.1 (39654289..39681927)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569258.1 (5865055..5892651, complement)

NW_025422057.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim23 Neighboring gene small nucleolar RNA SNORA74 Neighboring gene poly(ADP-ribose) glycohydrolase Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene chromosome unknown C10orf53 homolog Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxoglutarate dehydrogenase (succinyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oxoglutarate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoglutarate dehydrogenase-like, mitochondrial
Names
oxoglutarate dehydrogenase like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422057.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    39654289..39681927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004765860.3 → XP_004765917.1  2-oxoglutarate dehydrogenase-like, mitochondrial

    See identical proteins and their annotated locations for XP_004765917.1

    UniProtKB/TrEMBL
    M3YDF5
    Conserved Domains (5) summary
    PRK09404
    Location:46 → 997
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
    cd02016
    Location:247 → 510
    TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
    pfam02779
    Location:632 → 846
    Transket_pyr; Transketolase, pyrimidine binding domain
    pfam16078
    Location:46 → 76
    2-oxogl_dehyd_N; 2-oxoglutarate dehydrogenase N-terminus
    pfam16870
    Location:853 → 996
    OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal

  2. XM_004765858.3 → XP_004765915.1  2-oxoglutarate dehydrogenase-like, mitochondrial

    See identical proteins and their annotated locations for XP_004765915.1

    UniProtKB/TrEMBL
    M3YDF5
    Related
    ENSMPUP00000009362.1
    Conserved Domains (5) summary
    PRK09404
    Location:46 → 997
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
    cd02016
    Location:247 → 510
    TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
    pfam02779
    Location:632 → 846
    Transket_pyr; Transketolase, pyrimidine binding domain
    pfam16078
    Location:46 → 76
    2-oxogl_dehyd_N; 2-oxoglutarate dehydrogenase N-terminus
    pfam16870
    Location:853 → 996
    OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal

  3. XM_004765859.3 → XP_004765916.1  2-oxoglutarate dehydrogenase-like, mitochondrial

    See identical proteins and their annotated locations for XP_004765916.1

    UniProtKB/TrEMBL
    M3YDF5
    Conserved Domains (5) summary
    PRK09404
    Location:46 → 997
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
    cd02016
    Location:247 → 510
    TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
    pfam02779
    Location:632 → 846
    Transket_pyr; Transketolase, pyrimidine binding domain
    pfam16078
    Location:46 → 76
    2-oxogl_dehyd_N; 2-oxoglutarate dehydrogenase N-terminus
    pfam16870
    Location:853 → 996
    OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal
Nucleotide Protein
Heading Accession and Version

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