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ZBTB6 zinc finger and BTB domain containing 6 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101678380, updated on 8-Mar-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421428.1 (5229110..5249972, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569198.1 (10889653..10908283)

NW_025421428.1Genomic Context describing neighboring genes Neighboring gene phosducin like Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene serine/arginine repetitive matrix protein 2-like Neighboring gene U6 snRNA-associated Sm-like protein LSm3 Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene RAB GTPase activating protein 1 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421428.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    5229110..5249972 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013058779.2 → XP_012914233.1  zinc finger and BTB domain-containing protein 6

    See identical proteins and their annotated locations for XP_012914233.1

    UniProtKB/TrEMBL
    A0A8U0MV45
    Conserved Domains (5) summary
    smart00225
    Location:34 → 127
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:326 → 346
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:324 → 346
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:23 → 123
    BTB; BTB/POZ domain
    pfam13465
    Location:338 → 362
    zf-H2C2_2; Zinc-finger double domain

  2. XM_004757366.3 → XP_004757423.1  zinc finger and BTB domain-containing protein 6

    See identical proteins and their annotated locations for XP_004757423.1

    UniProtKB/TrEMBL
    A0A8U0MV45
    Conserved Domains (5) summary
    smart00225
    Location:34 → 127
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:326 → 346
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:324 → 346
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:23 → 123
    BTB; BTB/POZ domain
    pfam13465
    Location:338 → 362
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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