U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SNX30 sorting nexin family member 30 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101677734, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SNX30
Gene description
sorting nexin family member 30
See related
Ensembl:ENSMPUG00000007739
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SNX30 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421423.1 (15680942..15789053)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569162.1 (16674937..16782570)

NW_025421423.1Genomic Context describing neighboring genes Neighboring gene KIAA1958 ortholog Neighboring gene INTS3 and NABP interacting protein Neighboring gene solute carrier family 46 member 2 Neighboring gene lipocalin 9

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sorting nexin-30

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421423.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    15680942..15789053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004747824.3 → XP_004747881.1  sorting nexin-30 isoform X1

    UniProtKB/TrEMBL
    M3Y8M5
    Related
    ENSMPUP00000007682.1
    Conserved Domains (2) summary
    cd06860
    Location:91 → 206
    PX_SNX7_30_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 7 and 30
    cd07667
    Location:190 → 429
    BAR_SNX30; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 30

  2. XM_004747825.3 → XP_004747882.1  sorting nexin-30 isoform X3

    UniProtKB/TrEMBL
    A0A8U0STH4
    Conserved Domains (2) summary
    cd07283
    Location:91 → 206
    PX_SNX30; The phosphoinositide binding Phox Homology domain of Sorting Nexin 30
    cl12013
    Location:190 → 338
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  3. XM_013053870.2 → XP_012909324.1  sorting nexin-30 isoform X2

    UniProtKB/TrEMBL
    A0A8U0NSJ9
    Conserved Domains (2) summary
    cd06860
    Location:56 → 171
    PX_SNX7_30_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 7 and 30
    cd07667
    Location:155 → 394
    BAR_SNX30; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 30
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.