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ACER3 alkaline ceramidase 3 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101676373, updated on 18-Sep-2024

Summary

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Gene symbol
ACER3
Gene description
alkaline ceramidase 3
See related
Ensembl:ENSMPUG00000008559
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See ACER3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422126.1 (7187949..7353875)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569274.1 (214020..380886, complement)

NW_025422126.1Genomic Context describing neighboring genes Neighboring gene guanylate cyclase D-like Neighboring gene tsukushi, small leucine rich proteoglycan Neighboring gene U4 spliceosomal RNA Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 Neighboring gene calpain 5 Neighboring gene olfactory marker protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phytosphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422126.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    7187949..7353875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004767988.2 → XP_004768045.1  alkaline ceramidase 3 isoform X2

    UniProtKB/TrEMBL
    A0A8U0N6A0
    Conserved Domains (1) summary
    pfam05875
    Location:9 → 210
    Ceramidase

  2. XM_045071403.1 → XP_044927338.1  alkaline ceramidase 3 isoform X3

    UniProtKB/TrEMBL
    A0A8U0RM23

  3. XM_004767987.2 → XP_004768044.1  alkaline ceramidase 3 isoform X1

    UniProtKB/TrEMBL
    M3YAY7
    Related
    ENSMPUP00000008494.1
    Conserved Domains (1) summary
    pfam05875
    Location:9 → 259
    Ceramidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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