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KASH5 KASH domain containing 5 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101675868, updated on 8-Mar-2024

Summary

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Gene symbol
KASH5
Gene description
KASH domain containing 5
See related
Ensembl:ENSMPUG00000002672
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Also known as
CCDC155
Orthologs
human mouse all
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Genomic context

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See KASH5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421310.1 (10863207..10886003, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569271.1 (1494860..1517761, complement)

NW_025421310.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 7 Neighboring gene golgi associated olfactory signaling regulator Neighboring gene parathyroid hormone 2 Neighboring gene dickkopf like acrosomal protein 1 Neighboring gene TEA domain transcription factor 2 Neighboring gene CD37 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromosome localization to nuclear envelope involved in homologous chromosome segregation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homologous chromosome pairing at meiosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spindle localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome, telomeric region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lateral element IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of meiotic nuclear membrane microtubule tethering complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in meiotic spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein KASH5
Names
coiled-coil domain containing 155

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421310.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    10863207..10886003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004767319.3 → XP_004767376.1  protein KASH5 isoform X7

    UniProtKB/TrEMBL
    A0A8U0N3Y5
    Conserved Domains (4) summary
    pfam06632
    Location:279 → 392
    XRCC4; DNA double-strand break repair and V(D)J recombination protein XRCC4
    pfam14658
    Location:77 → 144
    EF-hand_9; EF-hand domain
    pfam14662
    Location:212 → 387
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam16046
    Location:234 → 312
    FAM76; FAM76 protein

  2. XM_013064159.2 → XP_012919613.1  protein KASH5 isoform X4

    UniProtKB/TrEMBL
    A0A8U0THN8
    Conserved Domains (5) summary
    COG4372
    Location:279 → 571
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06632
    Location:279 → 392
    XRCC4; DNA double-strand break repair and V(D)J recombination protein XRCC4
    pfam14658
    Location:77 → 144
    EF-hand_9; EF-hand domain
    pfam14662
    Location:212 → 387
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam16046
    Location:234 → 312
    FAM76; FAM76 protein

  3. XM_013064158.2 → XP_012919612.1  protein KASH5 isoform X3

    UniProtKB/TrEMBL
    A0A8U0NZ81
    Conserved Domains (5) summary
    COG4372
    Location:279 → 576
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06632
    Location:279 → 392
    XRCC4; DNA double-strand break repair and V(D)J recombination protein XRCC4
    pfam14658
    Location:77 → 144
    EF-hand_9; EF-hand domain
    pfam14662
    Location:212 → 387
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam16046
    Location:234 → 312
    FAM76; FAM76 protein

  4. XM_013064157.2 → XP_012919611.1  protein KASH5 isoform X2

    UniProtKB/TrEMBL
    A0A8U0NZW2
    Conserved Domains (5) summary
    COG4372
    Location:279 → 577
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06632
    Location:279 → 392
    XRCC4; DNA double-strand break repair and V(D)J recombination protein XRCC4
    pfam14658
    Location:77 → 144
    EF-hand_9; EF-hand domain
    pfam14662
    Location:212 → 387
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam16046
    Location:234 → 312
    FAM76; FAM76 protein

  5. XM_045077031.1 → XP_044932966.1  protein KASH5 isoform X6

    UniProtKB/TrEMBL
    A0A8U0V0D0
    Conserved Domains (2) summary
    COG1196
    Location:213 → 418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG4372
    Location:279 → 567
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

  6. XM_004767322.3 → XP_004767379.2  protein KASH5 isoform X1

    UniProtKB/TrEMBL
    A0A8U0T2C3
    Conserved Domains (5) summary
    COG4372
    Location:279 → 578
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06632
    Location:279 → 392
    XRCC4; DNA double-strand break repair and V(D)J recombination protein XRCC4
    pfam14658
    Location:77 → 144
    EF-hand_9; EF-hand domain
    pfam14662
    Location:212 → 387
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam16046
    Location:234 → 312
    FAM76; FAM76 protein

  7. XM_013064160.2 → XP_012919614.1  protein KASH5 isoform X5

    See identical proteins and their annotated locations for XP_012919614.1

    UniProtKB/TrEMBL
    A0A8U0NZS6
    Conserved Domains (5) summary
    COG4372
    Location:240 → 539
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    pfam06632
    Location:240 → 353
    XRCC4; DNA double-strand break repair and V(D)J recombination protein XRCC4
    pfam14658
    Location:38 → 105
    EF-hand_9; EF-hand domain
    pfam14662
    Location:173 → 348
    KASH_CCD; Coiled-coil region of CCDC155 or KASH
    pfam16046
    Location:195 → 273
    FAM76; FAM76 protein

  8. XM_045077035.1 → XP_044932970.1  protein KASH5 isoform X11

    UniProtKB/TrEMBL
    A0A8U0UYF0
    Conserved Domains (2) summary
    COG1196
    Location:98 → 303
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG4372
    Location:164 → 463
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

  9. XM_045077034.1 → XP_044932969.1  protein KASH5 isoform X10

    UniProtKB/TrEMBL
    A0A8U0S1L2
    Conserved Domains (1) summary
    COG1196
    Location:213 → 418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  10. XM_045077033.1 → XP_044932968.1  protein KASH5 isoform X9

    UniProtKB/TrEMBL
    A0A8U0UZA4
    Conserved Domains (1) summary
    COG1196
    Location:213 → 418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  11. XM_045077032.1 → XP_044932967.1  protein KASH5 isoform X8

    UniProtKB/TrEMBL
    A0A8U0RZ38
    Conserved Domains (1) summary
    COG1196
    Location:213 → 418
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version

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