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RTN4RL1 reticulon 4 receptor like 1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101675275, updated on 8-Mar-2024

Summary

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Gene symbol
RTN4RL1
Gene description
reticulon 4 receptor like 1
See related
Ensembl:ENSMPUG00000013116
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See RTN4RL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422106.1 (24024380..24094500, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569161.1 (1133405..1203576)

NW_025422106.1Genomic Context describing neighboring genes Neighboring gene SET and MYND domain containing 4 Neighboring gene replication protein A1 Neighboring gene U6 spliceosomal RNA Neighboring gene diphthamide biosynthesis 1 Neighboring gene OVCA2 serine hydrolase domain containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
reticulon-4 receptor-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422106.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    24024380..24094500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004746851.3 → XP_004746908.1  reticulon-4 receptor-like 1

    UniProtKB/TrEMBL
    M3YNW3
    Related
    ENSMPUP00000013020.1
    Conserved Domains (5) summary
    cd00116
    Location:102 → 255
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:150 → 188
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:174 → 233
    LRR_8; Leucine rich repeat
    cl15307
    Location:255 → 300
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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