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SFTPD surfactant protein D [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101672937, updated on 8-Mar-2024

Summary

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Gene symbol
SFTPD
Gene description
surfactant protein D
See related
Ensembl:ENSMPUG00000003586
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See SFTPD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421449.1 (10095351..10110122)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569253.1 (1862815..1877513, complement)

NW_025421449.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 254 Neighboring gene cytoplasmic polyadenylated homeobox like Neighboring gene pulmonary surfactant-associated protein A Neighboring gene mannose binding lectin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pulmonary surfactant-associated protein D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421449.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    10095351..10110122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004765299.3 → XP_004765356.1  pulmonary surfactant-associated protein D isoform X1

    UniProtKB/TrEMBL
    M3XWV7
    Related
    ENSMPUP00000003557.1
    Conserved Domains (3) summary
    cd03591
    Location:262 → 375
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:46 → 100
    Collagen; Collagen triple helix repeat (20 copies)
    pfam09006
    Location:224 → 269
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerization

  2. XM_004765300.3 → XP_004765357.1  pulmonary surfactant-associated protein D isoform X2

    UniProtKB/TrEMBL
    A0A8U0T1G5
    Conserved Domains (3) summary
    cd03591
    Location:261 → 374
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:46 → 100
    Collagen; Collagen triple helix repeat (20 copies)
    pfam09006
    Location:224 → 268
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerization
Nucleotide Protein
Heading Accession and Version

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