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LOC101671379 torsin-1A-interacting protein 2 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101671379, updated on 16-Nov-2023

Summary

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Gene symbol
LOC101671379
Gene description
torsin-1A-interacting protein 2
See related
Ensembl:ENSMPUG00000011357
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
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Genomic context

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See LOC101671379 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422457.1 (211446..251683, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569273.1 (186063..226089, complement)

NW_025422457.1Genomic Context describing neighboring genes Neighboring gene torsin-1A-interacting protein 2 Neighboring gene torsin 1A interacting protein 1 Neighboring gene centrosomal protein 350 Neighboring gene 40S ribosomal protein S27-like Neighboring gene coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2
Names
torsin A interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422457.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    211446..251683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004767885.1 → XP_004767942.1  torsin-1A-interacting protein 2

    See identical proteins and their annotated locations for XP_004767942.1

    UniProtKB/TrEMBL
    G9KUP4, M3YIV8
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 456
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_004767883.3 → XP_004767940.1  torsin-1A-interacting protein 2

    See identical proteins and their annotated locations for XP_004767940.1

    UniProtKB/TrEMBL
    G9KUP4, M3YIV8
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 456
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_004767884.3 → XP_004767941.1  torsin-1A-interacting protein 2

    See identical proteins and their annotated locations for XP_004767941.1

    UniProtKB/TrEMBL
    G9KUP4, M3YIV8
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 456
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_013064221.2 → XP_012919675.1  torsin-1A-interacting protein 2

    See identical proteins and their annotated locations for XP_012919675.1

    UniProtKB/TrEMBL
    G9KUP4, M3YIV8
    Related
    ENSMPUP00000011265.1
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 456
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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