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RPUSD3 RNA pseudouridine synthase D3 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101671151, updated on 8-Mar-2024

Summary

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Gene symbol
RPUSD3
Gene description
RNA pseudouridine synthase D3
See related
Ensembl:ENSMPUG00000017132
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See RPUSD3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422002.1 (10242523..10254583, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569143.1 (32800422..32806989, complement)

NW_025422002.1Genomic Context describing neighboring genes Neighboring gene transcriptional adaptor 3 Neighboring gene actin related protein 2/3 complex subunit 4 Neighboring gene tubulin tyrosine ligase like 3 Neighboring gene cell death inducing DFFA like effector c Neighboring gene intraflagellar transport protein 20 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial mRNA pseudouridine synthase RPUSD3
Names
RNA pseudouridylate synthase domain containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422002.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    10242523..10254583 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045063295.1 → XP_044919230.1  mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X2

    UniProtKB/TrEMBL
    A0A8U0UKT1
    Conserved Domains (1) summary
    cd02869
    Location:91 → 242
    PseudoU_synth_RluA_like; Pseudouridine synthase, RluA family

  2. XM_004738476.3 → XP_004738533.1  mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X1

    UniProtKB/TrEMBL
    G9KLW5, M3Z0B2
    Related
    ENSMPUP00000017023.1
    Conserved Domains (1) summary
    cd02869
    Location:91 → 276
    PseudoU_synth_RluCD_like; Pseudouridine synthase, RsuA/RluD family

  3. XM_045063296.1 → XP_044919231.1  mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X3

    UniProtKB/TrEMBL
    A0A8U0R9G3
    Conserved Domains (1) summary
    cl00130
    Location:91 → 206
    PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
Nucleotide Protein
Heading Accession and Version

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