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PNPLA7 patatin like phospholipase domain containing 7 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101670542, updated on 8-Mar-2024

Summary

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Gene symbol
PNPLA7
Gene description
patatin like phospholipase domain containing 7
See related
Ensembl:ENSMPUG00000015148
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See PNPLA7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
37
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421428.1 (16361862..16419381, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569514.1 (263591..321247, complement)

NW_025421428.1Genomic Context describing neighboring genes Neighboring gene NADPH oxidase activator 1 Neighboring gene collagen alpha-1(III) chain-like Neighboring gene ectonucleoside triphosphate diphosphohydrolase 8 Neighboring gene NMDA receptor synaptonuclear signaling and neuronal migration factor Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene diphthamide biosynthesis 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421428.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    16361862..16419381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045082812.1 → XP_044938747.1  patatin-like phospholipase domain-containing protein 7 isoform X2

    UniProtKB/TrEMBL
    A0A8U0SBS4, M3YUM9
    Conserved Domains (3) summary
    cd07225
    Location:937 → 1242
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:608 → 716
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  2. XM_045082811.1 → XP_044938746.1  patatin-like phospholipase domain-containing protein 7 isoform X1

    UniProtKB/TrEMBL
    A0A8U0SB26, M3YUM9
    Conserved Domains (3) summary
    cd07225
    Location:973 → 1278
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:644 → 752
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  3. XM_045082813.1 → XP_044938748.1  patatin-like phospholipase domain-containing protein 7 isoform X3

    UniProtKB/TrEMBL
    A0A8U0S9Z2
    Conserved Domains (3) summary
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:644 → 752
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cl11396
    Location:973 → 1116
    Patatin_and_cPLA2; Patatins and Phospholipases

RNA

  1. XR_006607486.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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