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VLDLR very low density lipoprotein receptor [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101663976, updated on 20-Sep-2024

Summary

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Gene symbol
VLDLR
Gene description
very low density lipoprotein receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See VLDLR in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103922.1 (5090020..5128820)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558790.1 (5090059..5128209)

NW_022103922.1Genomic Context describing neighboring genes Neighboring gene doublesex and mab-3 related transcription factor 2 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2 Neighboring gene potassium voltage-gated channel modifier subfamily V member 2 Neighboring gene pumilio RNA binding family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very low-density lipoprotein receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103922.1 Reference ASM31398v2 Primary Assembly

    Range
    5090020..5128820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045289196.1 → XP_045145131.1  very low-density lipoprotein receptor isoform X2

  2. XM_045289195.1 → XP_045145130.1  very low-density lipoprotein receptor isoform X1

  3. XM_045289197.1 → XP_045145132.1  very low-density lipoprotein receptor isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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