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VASP vasodilator stimulated phosphoprotein [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101661427, updated on 20-Sep-2024

Summary

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Gene symbol
VASP
Gene description
vasodilator stimulated phosphoprotein
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See VASP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022104553.1 (26036285..26050124, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558746.1 (10559743..10573273)

NW_022104553.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 4 Neighboring gene outer mitochondrial membrane lipid metabolism regulator OPA3 Neighboring gene reticulon 2 Neighboring gene transfer RNA opal suppressor (anticodon UCA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables profilin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural tube closure IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homotetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vasodilator-stimulated phosphoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022104553.1 Reference ASM31398v2 Primary Assembly

    Range
    26036285..26050124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045292792.1 → XP_045148727.1  vasodilator-stimulated phosphoprotein isoform X3

  2. XM_045292793.1 → XP_045148728.1  vasodilator-stimulated phosphoprotein isoform X4

  3. XM_045292791.1 → XP_045148726.1  vasodilator-stimulated phosphoprotein isoform X2

  4. XM_004710384.2 → XP_004710441.1  vasodilator-stimulated phosphoprotein isoform X1

    Conserved Domains (2) summary
    cd01207
    Location:6 → 113
    EVH1_Ena_VASP-like; Enabled/VASP family EVH1 domain
    pfam08776
    Location:344 → 379
    VASP_tetra; VASP tetramerisation domain
Nucleotide Protein
Heading Accession and Version

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