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NCF4 neutrophil cytosolic factor 4 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101657587, updated on 20-Sep-2024

Summary

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Gene symbol
NCF4
Gene description
neutrophil cytosolic factor 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See NCF4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103898.1 (13774410..13790882, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558708.1 (13774603..13790839, complement)

NW_022103898.1Genomic Context describing neighboring genes Neighboring gene thiosulfate sulfurtransferase Neighboring gene colony stimulating factor 2 receptor subunit beta Neighboring gene parvalbumin Neighboring gene intraflagellar transport 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide-generating NADPH oxidase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in respiratory burst IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in superoxide anion generation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NADPH oxidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: neutrophil cytosol factor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103898.1 Reference ASM31398v2 Primary Assembly

    Range
    13774410..13790882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004700305.2 → XP_004700362.1  LOW QUALITY PROTEIN: neutrophil cytosol factor 4

    Conserved Domains (3) summary
    cd06399
    Location:239 → 330
    PB1_P40; The PB1 domain is essential part of the p40 adaptor protein which plays an important role in activating phagocyte NADPH oxidase during phagocytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in ...
    cl02563
    Location:19 → 142
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl17036
    Location:175 → 228
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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