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TCF7L2 transcription factor 7 like 2 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101657493, updated on 20-Sep-2024

Summary

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Gene symbol
TCF7L2
Gene description
transcription factor 7 like 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See TCF7L2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103968.1 (16373140..16580060, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558709.1 (16084232..16303945, complement)

NW_022103968.1Genomic Context describing neighboring genes Neighboring gene nebulin related anchoring protein Neighboring gene hyaluronan binding protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene 60S acidic ribosomal protein P0-like Neighboring gene zinc finger DHHC-type palmitoyltransferase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of beta-catenin-TCF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin-TCF7L2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor 7-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103968.1 Reference ASM31398v2 Primary Assembly

    Range
    16373140..16580060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045291388.1 → XP_045147323.1  transcription factor 7-like 2 isoform X2

  2. XM_045291387.1 → XP_045147322.1  transcription factor 7-like 2 isoform X1

  3. XM_045291389.1 → XP_045147324.1  transcription factor 7-like 2 isoform X3

  4. XM_045291390.1 → XP_045147325.1  transcription factor 7-like 2 isoform X3

Nucleotide Protein
Heading Accession and Version

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