U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PPP1CA protein phosphatase 1 catalytic subunit alpha [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101653184, updated on 20-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
PPP1CA
Gene description
protein phosphatase 1 catalytic subunit alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PPP1CA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022111317.1 (3534726..3538912)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558777.1 (5327245..5363265, complement)

NW_022111317.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase B2 Neighboring gene carnosine synthase 1 Neighboring gene TBC1 domain family member 10C Neighboring gene RAD9 checkpoint clamp component A Neighboring gene U6 spliceosomal RNA Neighboring gene cardiotrophin like cytokine factor 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serine/threonine-protein phosphatase PP1-alpha catalytic subunit

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022111317.1 Reference ASM31398v2 Primary Assembly

    Range
    3534726..3538912
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045297151.1 → XP_045153086.1  serine/threonine-protein phosphatase PP1-alpha catalytic subunit

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.