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TANK TRAF family member associated NFKB activator [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101651972, updated on 20-Sep-2024

Summary

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Gene symbol
TANK
Gene description
TRAF family member associated NFKB activator
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See TANK in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103900.1 (13979950..14087086, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558717.1 (13980173..14036511, complement)

NW_022103900.1Genomic Context describing neighboring genes Neighboring gene T-box brain transcription factor 1 Neighboring gene proteasome 26S subunit, non-ATPase 14 Neighboring gene mitochondrial import receptor subunit TOM5 homolog Neighboring gene AP-5 complex subunit sigma-1-like Neighboring gene putative protein FAM172B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TRAF family member-associated NF-kappa-B activator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103900.1 Reference ASM31398v2 Primary Assembly

    Range
    13979950..14087086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045299648.1 → XP_045155583.1  TRAF family member-associated NF-kappa-B activator

    Conserved Domains (1) summary
    pfam12845
    Location:130 → 182
    TBD; TBD domain

  2. XM_004703790.2 → XP_004703847.1  TRAF family member-associated NF-kappa-B activator

    Conserved Domains (1) summary
    pfam12845
    Location:130 → 182
    TBD; TBD domain

  3. XM_045299651.1 → XP_045155586.1  TRAF family member-associated NF-kappa-B activator

    Conserved Domains (1) summary
    pfam12845
    Location:130 → 182
    TBD; TBD domain
Nucleotide Protein
Heading Accession and Version

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