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CNTFR ciliary neurotrophic factor receptor [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101647560, updated on 8-Mar-2024

Summary

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Gene symbol
CNTFR
Gene description
ciliary neurotrophic factor receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See CNTFR in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103922.1 (32277963..32306739, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558764.1 (9848991..9877808, complement)

NW_022103922.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal intermediate chain 1 Neighboring gene ATP synthase F(0) complex subunit C2, mitochondrial-like Neighboring gene energy homeostasis associated Neighboring gene ribonuclease P/MRP subunit p25 like Neighboring gene dynactin subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ciliary neurotrophic factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CNTFR-CLCF1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ciliary neurotrophic factor receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ciliary neurotrophic factor receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103922.1 Reference ASM31398v2 Primary Assembly

    Range
    32277963..32306739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004712382.2 → XP_004712439.1  ciliary neurotrophic factor receptor subunit alpha isoform X1

    Conserved Domains (2) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_045289298.1 → XP_045145233.1  ciliary neurotrophic factor receptor subunit alpha isoform X2

Nucleotide Protein
Heading Accession and Version

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