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ZBTB44 zinc finger and BTB domain containing 44 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101646841, updated on 20-Sep-2024

Summary

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Gene symbol
ZBTB44
Gene description
zinc finger and BTB domain containing 44
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See ZBTB44 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022109491.1 (56860693..56927857)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558788.1 (630985..697254, complement)

NW_022109491.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene amyloid beta precursor like protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022109491.1 Reference ASM31398v2 Primary Assembly

    Range
    56860693..56927857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013007627.2 → XP_012863081.1  zinc finger and BTB domain-containing protein 44 isoform X1

    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  2. XM_045295347.1 → XP_045151282.1  zinc finger and BTB domain-containing protein 44 isoform X2

  3. XM_045295348.1 → XP_045151283.1  zinc finger and BTB domain-containing protein 44 isoform X3

  4. XM_004714202.2 → XP_004714259.1  zinc finger and BTB domain-containing protein 44 isoform X4

    Conserved Domains (4) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  5. XM_045295349.1 → XP_045151284.1  zinc finger and BTB domain-containing protein 44 isoform X5

Nucleotide Protein
Heading Accession and Version

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