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CLEC7A C-type lectin domain containing 7A [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101645068, updated on 20-Sep-2024

Summary

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Gene symbol
CLEC7A
Gene description
C-type lectin domain containing 7A
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See CLEC7A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022105855.1 (5000759..5013796)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558858.1 (561230..574146)

NW_022105855.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 52B Neighboring gene oxidized low density lipoprotein receptor 1 Neighboring gene C-type lectin domain family 1 member A Neighboring gene C-type lectin domain containing 9A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables (1->3)-beta-D-glucan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pattern recognition receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to molecule of fungal origin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of fungus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of molecule of fungal origin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagocytosis, recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytokine production involved in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of killing of cells of another organism IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of lymphocyte activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 7 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022105855.1 Reference ASM31398v2 Primary Assembly

    Range
    5000759..5013796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030886453.2 → XP_030742313.2  C-type lectin domain family 7 member A isoform X3

  2. XM_045293266.1 → XP_045149201.1  C-type lectin domain family 7 member A isoform X1

  3. XM_045293267.1 → XP_045149202.1  C-type lectin domain family 7 member A isoform X2

Nucleotide Protein
Heading Accession and Version

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