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FOSL1 FOS like 1, AP-1 transcription factor subunit [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101642188, updated on 20-Sep-2024

Summary

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Gene symbol
FOSL1
Gene description
FOS like 1, AP-1 transcription factor subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See FOSL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022111317.1 (4898443..4905949)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558777.1 (3960517..3967519, complement)

NW_022111317.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C11orf68 homolog Neighboring gene DR1 associated protein 1 Neighboring gene coiled-coil domain containing 85B Neighboring gene U4 spliceosomal RNA Neighboring gene FGF1 intracellular binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fos-related antigen 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022111317.1 Reference ASM31398v2 Primary Assembly

    Range
    4898443..4905949
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004713542.2 → XP_004713599.1  fos-related antigen 1 isoform X1

    Conserved Domains (2) summary
    PRK13729
    Location:129 → 247
    PRK13729; conjugal transfer pilus assembly protein TraB; Provisional
    cd14721
    Location:115 → 168
    bZIP_Fos; Basic leucine zipper (bZIP) domain of the oncogene Fos (Fos): a DNA-binding and dimerization domain

  2. XM_013007492.2 → XP_012862946.1  fos-related antigen 1 isoform X2

    Conserved Domains (2) summary
    PRK13729
    Location:101 → 211
    PRK13729; conjugal transfer pilus assembly protein TraB; Provisional
    cl21462
    Location:93 → 132
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

  3. XM_013007493.2 → XP_012862947.1  fos-related antigen 1 isoform X3

    Conserved Domains (2) summary
    PRK13729
    Location:28 → 145
    PRK13729; conjugal transfer pilus assembly protein TraB; Provisional
    cl21462
    Location:32 → 66
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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