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PPP3CB protein phosphatase 3 catalytic subunit beta [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101642124, updated on 20-Sep-2024

Summary

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Gene symbol
PPP3CB
Gene description
protein phosphatase 3 catalytic subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See PPP3CB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022103968.1 (65702099..65765985, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558709.1 (65412066..65476471, complement)

NW_022103968.1Genomic Context describing neighboring genes Neighboring gene annexin A7 Neighboring gene GTP-binding nuclear protein Ran-like Neighboring gene MSS51 mitochondrial translational activator Neighboring gene ubiquitin specific peptidase 54 Neighboring gene chromobox protein homolog 3-like Neighboring gene ubiquitin-fold modifier 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin-dependent protein phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcineurin-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of calcineurin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 2B catalytic subunit beta isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022103968.1 Reference ASM31398v2 Primary Assembly

    Range
    65702099..65765985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045291199.1 → XP_045147134.1  serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X3

  2. XM_004701166.4 → XP_004701223.1  serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X5

    Conserved Domains (1) summary
    cd07416
    Location:50 → 354
    MPP_PP2B; PP2B, metallophosphatase domain

  3. XM_004701165.3 → XP_004701222.1  serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X4

    Conserved Domains (1) summary
    cd07416
    Location:50 → 354
    MPP_PP2B; PP2B, metallophosphatase domain

  4. XM_045291198.1 → XP_045147133.1  serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X2

  5. XM_045291197.1 → XP_045147132.1  serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1

  6. XM_045291200.1 → XP_045147135.1  serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X6

Nucleotide Protein
Heading Accession and Version

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