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KCNMB2 potassium calcium-activated channel subfamily M regulatory beta subunit 2 [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101641224, updated on 20-Sep-2024

Summary

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Gene symbol
KCNMB2
Gene description
potassium calcium-activated channel subfamily M regulatory beta subunit 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See KCNMB2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022108124.1 (4958342..5325682, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558733.1 (19611063..19977307)

NW_022108124.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha Neighboring gene zinc finger matrin-type 3 Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L35-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-activated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables potassium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated potassium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-activated potassium channel subunit beta-2
Names
potassium large conductance calcium-activated channel, subfamily M, beta member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022108124.1 Reference ASM31398v2 Primary Assembly

    Range
    4958342..5325682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004708595.3 → XP_004708652.1  calcium-activated potassium channel subunit beta-2

    Conserved Domains (2) summary
    pfam09303
    Location:2 → 32
    KcnmB2_inactiv; KCNMB2, ball and chain domain
    pfam03185
    Location:38 → 229
    CaKB; Calcium-activated potassium channel, beta subunit
Nucleotide Protein
Heading Accession and Version

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