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SGCG sarcoglycan gamma [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101640741, updated on 20-Sep-2024

Summary

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Gene symbol
SGCG
Gene description
sarcoglycan gamma
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See SGCG in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022106463.1 (3318338..3383535)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558794.1 (2774467..2811162, complement)

NW_022106463.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim9-like Neighboring gene probable ATP-dependent RNA helicase DDX49 Neighboring gene sacsin Neighboring gene sacsin molecular chaperone

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022106463.1 Reference ASM31398v2 Primary Assembly

    Range
    3318338..3383535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045294067.1 → XP_045150002.1  gamma-sarcoglycan isoform X1

  2. XM_004714821.2 → XP_004714878.1  gamma-sarcoglycan isoform X3

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_045294069.1 → XP_045150004.1  gamma-sarcoglycan isoform X3

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_045294068.1 → XP_045150003.1  gamma-sarcoglycan isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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