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PPIF peptidylprolyl isomerase F [ Echinops telfairi (small Madagascar hedgehog) ]

Gene ID: 101638230, updated on 20-Sep-2024

Summary

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Gene symbol
PPIF
Gene description
peptidylprolyl isomerase F
Gene type
protein coding
RefSeq status
MODEL
Organism
Echinops telfairi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
Orthologs
human mouse all
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Genomic context

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See PPIF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022111362.1 (2690282..2696194, complement)
101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558800.1 (2455744..2469551)

NW_022111362.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCHC-type containing 24 Neighboring gene lys-63-specific deubiquitinase BRCC36-like Neighboring gene zinc finger MIZ-type containing 1 Neighboring gene serine/arginine repetitive matrix protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hydrogen peroxide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein peptidyl-prolyl isomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitochondrial membrane permeability involved in programmed necrotic cell death IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptidyl-prolyl cis-trans isomerase F, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31398v2 Primary Assembly

Genomic

  1. NW_022111362.1 Reference ASM31398v2 Primary Assembly

    Range
    2690282..2696194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004715306.2 → XP_004715363.2  peptidyl-prolyl cis-trans isomerase F, mitochondrial

Nucleotide Protein
Heading Accession and Version

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