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LOC101616121 40S ribosomal protein S28-like [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101616121, updated on 16-Nov-2023

Summary

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Gene symbol
LOC101616121
Gene description
40S ribosomal protein S28-like
See related
EnsemblRapid:ENSJJAG00000010478
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
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Genomic context

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See LOC101616121 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
1
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 18 NC_059119.1 (573107..573393)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504336.1 (571991..572275)

Chromosome 18 - NC_059119.1Genomic Context describing neighboring genes Neighboring gene protocadherin related 15 Neighboring gene shieldin complex subunit 3-like Neighboring gene 60S acidic ribosomal protein P1-like Neighboring gene protein FAM136A-like Neighboring gene YTH domain-containing family protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S28-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059119.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    573107..573393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045137144.1 → XP_044993079.1  40S ribosomal protein S28-like

    UniProtKB/TrEMBL
    A0A8C5K9F1
    Related
    ENSJJAP00000005556.2, ENSJJAT00000011934.2
Nucleotide Protein
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