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Ints11 integrator complex subunit 11 [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101609861, updated on 10-Oct-2024

Summary

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Gene symbol
Ints11
Gene description
integrator complex subunit 11
See related
EnsemblRapid:ENSJJAG00000008717
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Also known as
Cpsf3l
Orthologs
human mouse all
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Genomic context

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See Ints11 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 5 NC_059106.1 (36979565..36999891, complement)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504335.1 (31395074..31415030)

Chromosome 5 - NC_059106.1Genomic Context describing neighboring genes Neighboring gene sodium channel epithelial 1 subunit delta Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 Neighboring gene pseudouridine synthase like 1 Neighboring gene ceramide-1-phosphate transfer protein Neighboring gene taste 1 receptor member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in snRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrator complex subunit 11
Names
cleavage and polyadenylation specific factor 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059106.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    36979565..36999891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004657764.2 → XP_004657821.1  integrator complex subunit 11 isoform X1

    UniProtKB/TrEMBL
    A0A8C5K884
    Related
    ENSJJAP00000004288.2, ENSJJAT00000010011.2
    Conserved Domains (4) summary
    smart01027
    Location:245 → 363
    Beta-Casp; Beta-Casp domain
    COG1236
    Location:4 → 444
    YSH1; RNA processing exonuclease, beta-lactamase fold, Cft2 family [Translation, ribosomal structure and biogenesis]
    pfam07521
    Location:376 → 416
    RMMBL; RNA-metabolizing metallo-beta-lactamase
    cd16291
    Location:6 → 204
    INTS11-like_MBL-fold; Integrator complex subunit 11, and related proteins; MBL-fold metallo-hydrolase domain

  2. XM_045150988.1 → XP_045006923.1  integrator complex subunit 11 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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