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Nup35 nucleoporin 35 [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101603106, updated on 8-Mar-2024

Summary

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Gene symbol
Nup35
Gene description
nucleoporin 35
See related
EnsemblRapid:ENSJJAG00000016432
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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See Nup35 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 4 NC_059105.1 (56045703..56079488, complement)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504347.1 (9781533..9814625, complement)

Chromosome 4 - NC_059105.1Genomic Context describing neighboring genes Neighboring gene proline-rich nuclear receptor coactivator 2-like Neighboring gene U6 spliceosomal RNA Neighboring gene dual specificity phosphatase 19 Neighboring gene small nucleolar RNA SNORA44

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NLS-bearing protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear pore organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore central transport channel IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore nuclear basket IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleoporin NUP35

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059105.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    56045703..56079488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004660277.2 → XP_004660334.1  nucleoporin NUP35

    UniProtKB/TrEMBL
    A0A8C5KUN8, A0A8C5P0F8
    Related
    ENSJJAP00000013816.2, ENSJJAT00000020310.2
    Conserved Domains (2) summary
    cd12722
    Location:172 → 245
    RRM_Nup53; RNA recognition motif in nucleoporin Nup53
    cl00779
    Location:131 → 211
    NQR2_RnfD_RnfE; NQR2, RnfD, RnfE family
Nucleotide Protein
Heading Accession and Version

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