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Rpl27a ribosomal protein L27a [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101602952, updated on 8-Mar-2024

Summary

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Gene symbol
Rpl27a
Gene description
ribosomal protein L27a
See related
EnsemblRapid:ENSJJAG00000012554
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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See Rpl27a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 3 NC_059104.1 (175473956..175476302)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504315.1 (15030548..15032817, complement)

Chromosome 3 - NC_059104.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 33 Neighboring gene tripartite motif containing 66 Neighboring gene small nucleolar RNA SNORA3/SNORA45 family Neighboring gene small nucleolar RNA SNORA3/SNORA45 family Neighboring gene DENN domain containing 2B Neighboring gene A-kinase interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L27a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059104.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    175473956..175476302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004650887.3 → XP_004650944.1  60S ribosomal protein L27a

    See identical proteins and their annotated locations for XP_004650944.1

    UniProtKB/TrEMBL
    A0A8C5KD04, A0A8C5KF93
    Related
    ENSJJAP00000008395.1, ENSJJAT00000014822.2
    Conserved Domains (1) summary
    PTZ00160
    Location:1 → 148
    PTZ00160; 60S ribosomal protein L27a; Provisional
Nucleotide Protein
Heading Accession and Version

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