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Polr1c RNA polymerase I and III subunit C [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101602643, updated on 8-Mar-2024

Summary

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Gene symbol
Polr1c
Gene description
RNA polymerase I and III subunit C
See related
EnsemblRapid:ENSJJAG00000023110
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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See Polr1c in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 8 NC_059109.1 (11939536..11944192)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504313.1 (67905965..67910393, complement)

Chromosome 8 - NC_059109.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 73 Neighboring gene Yip1 domain family member 3 Neighboring gene exportin 5 Neighboring gene small nucleolar RNA SNORA20 Neighboring gene DNA polymerase eta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase I activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase III activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I and III subunit RPAC1
Names
RNA polymerase I subunit C
polymerase (RNA) I polypeptide C, 30kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059109.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    11939536..11944192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004649466.2 → XP_004649523.1  DNA-directed RNA polymerases I and III subunit RPAC1

    UniProtKB/TrEMBL
    A0A8C5LBV7
    Related
    ENSJJAP00000023300.1, ENSJJAT00000029875.2
    Conserved Domains (2) summary
    cd07032
    Location:49 → 339
    RNAP_I_II_AC40; AC40 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III
    smart00662
    Location:61 → 336
    RPOLD; RNA polymerases D
Nucleotide Protein
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