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Nsun5 NOP2/Sun RNA methyltransferase 5 [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101601655, updated on 8-Mar-2024

Summary

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Gene symbol
Nsun5
Gene description
NOP2/Sun RNA methyltransferase 5
See related
EnsemblRapid:ENSJJAG00000012146
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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See Nsun5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 2 NC_059103.1 (12597120..12601574, complement)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504402.1 (1168487..1172879)

Chromosome 2 - NC_059103.1Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine ligand 24 Neighboring gene huntingtin interacting protein 1 Neighboring gene POM121 transmembrane nucleoporin C Neighboring gene tripartite motif containing 50 Neighboring gene U6 spliceosomal RNA Neighboring gene FKBP prolyl isomerase family member 6 (inactive)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA base methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
28S rRNA (cytosine-C(5))-methyltransferase
Names
NOP2/Sun RNA methyltransferase family member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059103.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    12597120..12601574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004666189.2 → XP_004666246.1  28S rRNA (cytosine-C(5))-methyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8C5KC05
    Conserved Domains (2) summary
    TIGR00446
    Location:139 → 424
    nop2p; NOL1/NOP2/sun family putative RNA methylase
    cl17173
    Location:219 → 422
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_045142686.1 → XP_044998621.1  28S rRNA (cytosine-C(5))-methyltransferase isoform X1

    Related
    ENSJJAP00000007808.2, ENSJJAT00000014228.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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