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Syf2 SYF2 pre-mRNA splicing factor [ Jaculus jaculus (lesser Egyptian jerboa) ]

Gene ID: 101597493, updated on 8-Mar-2024

Summary

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Gene symbol
Syf2
Gene description
SYF2 pre-mRNA splicing factor
See related
EnsemblRapid:ENSJJAG00000013301
Gene type
protein coding
RefSeq status
MODEL
Organism
Jaculus jaculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
Orthologs
human mouse all
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Genomic context

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See Syf2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
102 current mJacJac1.mat.Y.cur (GCF_020740685.1) 5 NC_059106.1 (57735679..57742405, complement)
101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504335.1 (9612730..9617503)

Chromosome 5 - NC_059106.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123460782 Neighboring gene RUNX family transcription factor 3 Neighboring gene U6 spliceosomal RNA Neighboring gene centrosomal protein of 19 kDa-like Neighboring gene arginine and serine rich protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor SYF2
Names
SYF2 homolog, RNA splicing factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mJacJac1.mat.Y.cur Primary Assembly

Genomic

  1. NC_059106.1 Reference mJacJac1.mat.Y.cur Primary Assembly

    Range
    57735679..57742405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045150094.1 → XP_045006029.1  pre-mRNA-splicing factor SYF2

    Related
    ENSJJAP00000009441.2, ENSJJAT00000015889.2
Nucleotide Protein
Heading Accession and Version

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