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TMED5 transmembrane p24 trafficking protein 5 [ Sorex araneus (European shrew) ]

Gene ID: 101555947, updated on 8-Mar-2024

Summary

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Gene symbol
TMED5
Gene description
transmembrane p24 trafficking protein 5
See related
EnsemblRapid:ENSSARG00000033111
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See TMED5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 5 NC_073306.1 (81636675..81654284, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004546004.1 (1843912..1858087, complement)

Chromosome 5 - NC_073306.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD19 Neighboring gene metal response element binding transcription factor 2 Neighboring gene coiled-coil domain containing 18 Neighboring gene small nucleolar RNA SNORA66

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073306.1 Reference mSorAra2.pri

    Range
    81636675..81654284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055139823.1 → XP_054995798.1  transmembrane emp24 domain-containing protein 5 isoform X1

    Related
    ENSSARP00000018682.1, ENSSART00000020843.1

  2. XM_055139824.1 → XP_054995799.1  transmembrane emp24 domain-containing protein 5 isoform X2

Nucleotide Protein
Heading Accession and Version

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