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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Sorex araneus (European shrew) ]

Gene ID: 101552270, updated on 8-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
EnsemblRapid:ENSSARG00000011271
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 2 NC_073303.1 (161560908..161642463, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545878.1 (28228270..28280149, complement)

Chromosome 2 - NC_073303.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene small nucleolar RNA U3 Neighboring gene splicing factor Cactin-like Neighboring gene ferritin, heavy subunit-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073303.1 Reference mSorAra2.pri

    Range
    161560908..161642463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004606751.2 → XP_004606808.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:83 → 330
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_055126150.1 → XP_054982125.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  3. XM_055126151.1 → XP_054982126.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Related
    ENSSARP00000010164.2, ENSSART00000011264.2

  4. XM_055126152.1 → XP_054982127.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  5. XM_055126153.1 → XP_054982128.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

Nucleotide Protein
Heading Accession and Version

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