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ZBTB6 zinc finger and BTB domain containing 6 [ Sorex araneus (European shrew) ]

Gene ID: 101550172, updated on 8-Mar-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
See related
EnsemblRapid:ENSSARG00000021313
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 1 NC_073302.1 (9229233..9254830)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545920.1 (9308818..9310092)

Chromosome 1 - NC_073302.1Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1 Neighboring gene uncharacterized LOC129400807 Neighboring gene G protein-coupled receptor 21 Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene phosducin like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073302.1 Reference mSorAra2.pri

    Range
    9229233..9254830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055132762.1 → XP_054988737.1  zinc finger and BTB domain-containing protein 6

    Related
    ENSSARP00000025198.1, ENSSART00000026846.1

  2. XM_055132777.1 → XP_054988752.1  zinc finger and BTB domain-containing protein 6

    Related
    ENSSARP00000036175.1, ENSSART00000035209.1

  3. XM_055132769.1 → XP_054988744.1  zinc finger and BTB domain-containing protein 6

Nucleotide Protein
Heading Accession and Version

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