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UBXN2B UBX domain protein 2B [ Sorex araneus (European shrew) ]

Gene ID: 101546608, updated on 8-Mar-2024

Summary

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Gene symbol
UBXN2B
Gene description
UBX domain protein 2B
See related
EnsemblRapid:ENSSARG00000033259
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 2 NC_073303.1 (87940912..87969693, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545861.1 (41020273..41042549, complement)

Chromosome 2 - NC_073303.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 7A1 Neighboring gene ubiquitin-40S ribosomal protein S27a-like Neighboring gene U2 spliceosomal RNA Neighboring gene THO complex subunit 5 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073303.1 Reference mSorAra2.pri

    Range
    87940912..87969693 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004602438.2 → XP_004602495.2  UBX domain-containing protein 2B isoform X1

  2. XM_055128163.1 → XP_054984138.1  UBX domain-containing protein 2B isoform X2

    Related
    ENSSARP00000024654.1, ENSSART00000050619.1

  3. XM_055128164.1 → XP_054984139.1  UBX domain-containing protein 2B isoform X3

    Related
    ENSSARP00000027383.1, ENSSART00000046468.1
Nucleotide Protein
Heading Accession and Version

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