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LOC101546488 C1GALT1-specific chaperone 1-like [ Sorex araneus (European shrew) ]

Gene ID: 101546488, updated on 2-Nov-2023

Summary

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Gene symbol
LOC101546488
Gene description
C1GALT1-specific chaperone 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
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Genomic context

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See LOC101546488 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 8 NC_073309.1 (62648344..62649659)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545933.1 (8872561..8873517, complement)

Chromosome 8 - NC_073309.1Genomic Context describing neighboring genes Neighboring gene collagen type XI alpha 1 chain Neighboring gene protein SET-like Neighboring gene olfactomedin 3 Neighboring gene immediate early response 3-interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: C1GALT1-specific chaperone 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073309.1 Reference mSorAra2.pri

    Range
    62648344..62649659
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004614661.2 → XP_004614718.2  LOW QUALITY PROTEIN: C1GALT1-specific chaperone 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases