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SCD stearoyl-CoA desaturase [ Sorex araneus (European shrew) ]

Gene ID: 101544988, updated on 8-Mar-2024

Summary

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Gene symbol
SCD
Gene description
stearoyl-CoA desaturase
See related
EnsemblRapid:ENSSARG00000009817
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human all
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Genomic context

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See SCD in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 11 NC_073312.1 (26555917..26571901, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545950.1 (2847335..2858995, complement)

Chromosome 11 - NC_073312.1Genomic Context describing neighboring genes Neighboring gene SEC31 homolog B, COPII coat complex component Neighboring gene Wnt family member 8B Neighboring gene polycystin 2 like 1, transient receptor potential cation channel Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stearoyl-CoA desaturase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073312.1 Reference mSorAra2.pri

    Range
    26555917..26571901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004616355.2 → XP_004616412.1  stearoyl-CoA desaturase

    Related
    ENSSARP00000008875.2, ENSSART00000009812.2
    Conserved Domains (2) summary
    cd03505
    Location:100 → 337
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
    pfam00487
    Location:102 → 306
    FA_desaturase; Fatty acid desaturase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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