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ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [ Sorex araneus (European shrew) ]

Gene ID: 101543877, updated on 8-Mar-2024

Summary

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Gene symbol
ST6GALNAC5
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
See related
EnsemblRapid:ENSSARG00000033208
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See ST6GALNAC5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 5 NC_073306.1 (65526541..65720945)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545864.1 (14177244..14367421, complement)

Chromosome 5 - NC_073306.1Genomic Context describing neighboring genes Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 Neighboring gene 60S ribosomal protein L37a-like Neighboring gene U2 small nuclear ribonucleoprotein B''-like Neighboring gene small nucleolar RNA SNORA70 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class K

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073306.1 Reference mSorAra2.pri

    Range
    65526541..65720945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004603335.2 → XP_004603392.2  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

    Related
    ENSSARP00000035075.1, ENSSART00000025284.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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