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AGXT alanine--glyoxylate aminotransferase [ Sorex araneus (European shrew) ]

Gene ID: 101543530, updated on 18-Sep-2024

Summary

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Gene symbol
AGXT
Gene description
alanine--glyoxylate aminotransferase
See related
EnsemblRapid:ENSSARG00000030660
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See AGXT in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) X NC_073313.1 (157820111..157826393)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004546022.1 (614608..620754, complement)

Chromosome X - NC_073313.1Genomic Context describing neighboring genes Neighboring gene aquaporin-12-like Neighboring gene kinesin family member 1A Neighboring gene uncharacterized LOC129400070 Neighboring gene mab-21 like 4 Neighboring gene ciliary rootlet coiled-coil, rootletin family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine-pyruvate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alanine-glyoxylate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine biosynthetic process, by transamination of glyoxylate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine--glyoxylate aminotransferase
Names
alanine--glyoxylate and serine--pyruvate aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073313.1 Reference mSorAra2.pri

    Range
    157820111..157826393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004620680.3 → XP_004620737.1  alanine--glyoxylate aminotransferase

    Related
    ENSSARP00000038200.1, ENSSART00000021959.1
    Conserved Domains (2) summary
    cd06451
    Location:24 → 385
    AGAT_like; Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), ...
    COG0075
    Location:21 → 387
    PucG; Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG [Amino acid transport and metabolism, Nucleotide transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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