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PLA2G4A phospholipase A2 group IVA [ Sorex araneus (European shrew) ]

Gene ID: 101543498, updated on 8-Mar-2024

Summary

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Gene symbol
PLA2G4A
Gene description
phospholipase A2 group IVA
See related
EnsemblRapid:ENSSARG00000012224
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See PLA2G4A in Genome Data Viewer
Location:
chromosome: X
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) X NC_073313.1 (168064610..168169377)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545922.1 (1229560..1313904, complement)

Chromosome X - NC_073313.1Genomic Context describing neighboring genes Neighboring gene phosducin Neighboring gene prostaglandin-endoperoxide synthase 2 Neighboring gene neurexophilin 2 Neighboring gene speckle type BTB/POZ protein like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073313.1 Reference mSorAra2.pri

    Range
    168064610..168169377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055123076.1 → XP_054979051.1  cytosolic phospholipase A2 isoform X1

    Related
    ENSSARP00000011043.2, ENSSART00000012228.2

  2. XM_055123077.1 → XP_054979052.1  cytosolic phospholipase A2 isoform X2

  3. XM_055123078.1 → XP_054979053.1  cytosolic phospholipase A2 isoform X3

RNA

  1. XR_008627425.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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