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LOC101540995 mannose-binding protein A-like [ Sorex araneus (European shrew) ]

Gene ID: 101540995, updated on 2-Nov-2023

Summary

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Gene symbol
LOC101540995
Gene description
mannose-binding protein A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
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Genomic context

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See LOC101540995 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 11 NC_073312.1 (46378384..46384187)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545882.1 (14089719..14093520)

Chromosome 11 - NC_073312.1Genomic Context describing neighboring genes Neighboring gene methionine adenosyltransferase 1A Neighboring gene pulmonary surfactant-associated protein A-like Neighboring gene surfactant protein D Neighboring gene transmembrane protein 254

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073312.1 Reference mSorAra2.pri

    Range
    46378384..46384187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004607431.2 → XP_004607488.2  mannose-binding protein A-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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