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P3H2 prolyl 3-hydroxylase 2 [ Sorex araneus (European shrew) ]

Gene ID: 101537434, updated on 8-Mar-2024

Summary

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Gene symbol
P3H2
Gene description
prolyl 3-hydroxylase 2
See related
EnsemblRapid:ENSSARG00000012727
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Also known as
LEPREL1
Orthologs
human mouse all
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Genomic context

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See P3H2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 2 NC_073303.1 (287940820..288128259)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545863.1 (26158673..26345756)

Chromosome 2 - NC_073303.1Genomic Context describing neighboring genes Neighboring gene claudin 16 Neighboring gene claudin 1 Neighboring gene tumor protein p63 Neighboring gene 60S ribosomal protein L21-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2
Names
leprecan-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073303.1 Reference mSorAra2.pri

    Range
    287940820..288128259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004603009.2 → XP_004603066.2  prolyl 3-hydroxylase 2

    Related
    ENSSARP00000011507.2, ENSSART00000012743.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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