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PIGO phosphatidylinositol glycan anchor biosynthesis class O [ Ochotona princeps (American pika) ]

Gene ID: 101535521, updated on 8-Mar-2024

Summary

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Gene symbol
PIGO
Gene description
phosphatidylinositol glycan anchor biosynthesis class O
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See PIGO in Genome Data Viewer
Location:
chromosome: 14
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 14 NC_080845.1 (32064156..32071333)
102 previous assembly OchPri4.0 (GCF_014633375.1) 1A NC_050558.1 (32653713..32659842)

Chromosome 14 - NC_080845.1Genomic Context describing neighboring genes Neighboring gene atos homolog B Neighboring gene stomatin like 2 Neighboring gene FA complementation group G Neighboring gene valosin containing protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI ethanolamine phosphate transferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080845.1 Reference mOchPri1.hap1

    Range
    32064156..32071333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058672535.1 → XP_058528518.1  GPI ethanolamine phosphate transferase 3 isoform X3

  2. XM_058672534.1 → XP_058528517.1  GPI ethanolamine phosphate transferase 3 isoform X2

  3. XM_004581017.2 → XP_004581074.2  GPI ethanolamine phosphate transferase 3 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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