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SLC25A20 solute carrier family 25 member 20 [ Ochotona princeps (American pika) ]

Gene ID: 101535349, updated on 8-Mar-2024

Summary

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Gene symbol
SLC25A20
Gene description
solute carrier family 25 member 20
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See SLC25A20 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 21 NC_080852.1 (27011712..27030253)
102 previous assembly OchPri4.0 (GCF_014633375.1) 9A NC_050565.1 (17275044..17292616, complement)

Chromosome 21 - NC_080852.1Genomic Context describing neighboring genes Neighboring gene secreted frizzled-related protein 5-like Neighboring gene prolyl 4-hydroxylase, transmembrane Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene protein kinase cAMP-dependent type II regulatory subunit alpha Neighboring gene inositol hexakisphosphate kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables low-density lipoprotein particle binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080852.1 Reference mOchPri1.hap1

    Range
    27011712..27030253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058678895.1 → XP_058534878.1  mitochondrial carnitine/acylcarnitine carrier protein

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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