U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DSE dermatan sulfate epimerase [ Ochotona princeps (American pika) ]

Gene ID: 101534936, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DSE
Gene description
dermatan sulfate epimerase
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DSE in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 1 NC_080832.1 (46353844..46428806, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 12 NC_050547.1 (104091361..104164193)

Chromosome 1 - NC_080832.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 3L Neighboring gene calcium homeostasis modulator family member 5 Neighboring gene calcium homeostasis modulator family member 6 Neighboring gene TSPY like 1 Neighboring gene TSPY like 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chondroitin-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
dermatan-sulfate epimerase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080832.1 Reference mOchPri1.hap1

    Range
    46353844..46428806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058656303.1 → XP_058512286.1  dermatan-sulfate epimerase isoform X4

  2. XM_058656154.1 → XP_058512137.1  dermatan-sulfate epimerase isoform X2

  3. XM_058656092.1 → XP_058512075.1  dermatan-sulfate epimerase isoform X2

  4. XM_058656199.1 → XP_058512182.1  dermatan-sulfate epimerase isoform X2

  5. XM_004580305.4 → XP_004580362.2  dermatan-sulfate epimerase isoform X1

  6. XM_058656232.1 → XP_058512215.1  dermatan-sulfate epimerase isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.